Complete List of Works

@article{info:hdl:2013/220549b,

title = {DIDA: A curated and annotated digenic diseases database.},

author = {Andrea Gazzo and Dorien Daneels and Elisa Cilia and Maryse Bonduelle and Marc Abramowicz and Sonia Van Dooren and Guillaume Smits and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/220549},

year  = {2015},

date = {2015-01-01},

journal = {Nucleic acids research},

note = {DOI: 10.1093/nar/gkv1068},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/220724b,

title = {Emergence of cooperation via intention recognition, commitment and apology-A research summary},

author = {The Anh T. A. H. Han and Luís Moniz Pereira and Francisco C. Santos and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/220724},

year  = {2015},

date = {2015-01-01},

journal = {AI communications},

volume = {28},

number = {4},

pages = {709-715},

note = {DOI: 10.3233/AIC-150672},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/265293b,

title = {Genome-wide hydroxymethylcytosine pattern changes in response to oxidative stress.},

author = {Benjamin Delatte and Jana Jeschke and Matthieu Defrance and Martin Bachman and Catherine Creppe and Emilie Calonne and Martin Bizet and Rachel Deplus and Laura Marroquí and Myriam Libin and Mirunalini Ravichandran and Franccoise Mascart and Decio L. Eizirik and Adele Murrell and Tomasz Piotr Jurkowski and Franccois Fuks},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/265293},

year  = {2015},

date = {2015-01-01},

journal = {Scientific reports},

volume = {5},

pages = {12714},

note = {DOI: 10.1038/srep12714},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/223764b,

title = {Template attacks vs Machine Learning Revisited},

author = {Liran Lerman and Romain Poussier and Gianluca Bontempi and Olivier Markowitch and Franccois-Xavier Standaert},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/223764},

year  = {2015},

date = {2015-01-01},

journal = {Lecture notes in computer science},

volume = {9064},

pages = {20-33},

note = {Language of publication: en},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/262159b,

title = {Sox9 Controls Self-Renewal of Oncogene Targeted Cells and Links Tumor Initiation and Invasion.},

author = {Jean-Christophe Larsimont and Youssef Khalil Kass and Adriana Sanchez Danes and Vijayakumar Sukumaran and Matthieu Defrance and Benjamin Delatte and Mélanie Liagre and Pieter Baatsen and Jean-Christophe Marine and Saskia Lippens and Christopher Guerin and Véronique Del Marmol and Jean-Marie Vanderwinden and Franccois Fuks and Cédric Blanpain},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/262159},

year  = {2015},

date = {2015-01-01},

journal = {Cell stem cell},

volume = {17},

number = {1},

pages = {60-73},

note = {DOI: 10.1016/j.stem.2015.05.008},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/205370b,

title = {Apology and forgiveness evolve to resolve failures in cooperative agreements},

author = {Luis L. A. Martinez-Vaquero and The Anh T. A. H. Han and Luís Marcelo Pereira and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/205370},

year  = {2015},

date = {2015-01-01},

journal = {Scientific reports},

volume = {5},

note = {DOI: 10.1038/srep10639},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/205371b,

title = {A machine learning approach against a masked AES: Reaching the limit of side-channel attacks with a learning model},

author = {Liran Lerman and Gianluca Bontempi and Olivier Markowitch},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/205371},

year  = {2015},

date = {2015-01-01},

journal = {Journal of Cryptographic Engineering},

volume = {5},

number = {2},

pages = {123-139},

note = {DOI: 10.1007/s13389-014-0089-3},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/205439b,

title = {Using shRNA experiments to validate gene regulatory networks},

author = {Catharina Olsen and Kathleen Fleming and Niall Prendergast and Renee Rubio and Frank Emmert-Streib and Gianluca Bontempi and John Quackenbush and Benjamin Haibe-Kains},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/205439},

year  = {2015},

date = {2015-01-01},

journal = {Genomics Data},

volume = {4},

pages = {123-126},

note = {DOI: 10.1016/j.gdata.2015.03.011},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/200950b,

title = {Ocean plankton. Determinants of community structure in the global plankton interactome.},

author = {Gipsi Lima Mendez and Karoline Faust and N Lynn Henry and Johan Decelle and Simon Colin and Fabrizio Carcillo and Samuel Chaffron and Cesar JC Ignacio-Espinosa and Simon Roux and Flora Vincent and Lucie Bittner and Youssef Darzi and Jun Wang and Stéphane Audic and Léo Berline and Gianluca Bontempi and Ana AM Cabello and Laurent Coppola and Francisco FM Cornejo-Castillo and Francesco d'Ovidio and Luc De Meester and Isabel Ferrera and Marie-José Garet-Delmas and Lionel Guidi and Elena Lara and Stéphane Pesant and Marta Royo-Llonch and Guillem Salazar and Paloma Sanchez and Marta Sebastian and Caroline Souffreau and Céline Dimier and Marc Picheral and Sarah Searson and Stefanie Kandels-Lewis and Tara Oceans coordinators and Gabriel Gorsky and Fabrice Not and Hiroyuki Ogata and Sabrina Speich and Lars Stemmann and Jean Weissenbach and Patrick Wincker and Silvia SG Acinas and Shinichi Sunagawa and Peer Bork and Matthew B Sullivan and Eric Karsenti and Chris Bowler and Colomban Vargas and Jeroen JR Raes},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/200950},

year  = {2015},

date = {2015-01-01},

journal = {Science},

volume = {348},

number = {6237},

pages = {1262073},

note = {DOI: 10.1126/science.1262073},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/262160b,

title = {5-hydroxymethylcytosine marks promoters in colon that resist DNA hypermethylation in cancer.},

author = {Santiago Uribe-Lewis and Rory Stark and Thomas Carroll and Mark J Dunning and Martin Bachman and Yoko Ito and Lovorka Stojic and Silvia Halim and Sarah L Vowler and Andy G Lynch and Benjamin Delatte and Eric James Bony and Laurence Colin and Matthieu Defrance and Felix Krueger and Ana Luisa Silva and Rogier Hoopen and Ashraf Ek Ibrahim and Adele Murrell and Franccois Fuks},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/262160},

year  = {2015},

date = {2015-01-01},

journal = {Genome biology},

volume = {16},

pages = {69},

note = {DOI: 10.1186/s13059-015-0605-5},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/197743b,

title = {Synergy between intention recognition and commitments in cooperation dilemmas},

author = {The Anh T. A. H. Han and Francisco C. Santos and Tom Lenaerts and Luís Marcelo Pereira},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/197743},

year  = {2015},

date = {2015-01-01},

journal = {Scientific Reports},

volume = {5},

note = {DOI: 10.1038/srep09312},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/206321b,

title = {Multi-pheromone ant Colony Optimization for Socio-cognitive Simulation Purposes},

author = {Mateusz Sekara and Michael Kowalski and Aleksander Byrski and Bipin Indurkhya and Marek Kisiel-Dorohinicki and Dana Samson and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/206321},

year  = {2015},

date = {2015-01-01},

journal = {Procedia Computer Science},

volume = {51},

pages = {954-963},

note = {DOI: 10.1016/j.procs.2015.05.234},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/205981b,

title = {Avoiding or restricting defectors in public goods games?},

author = {The Anh T. A. H. Han and Luís Moniz Pereira and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/205981},

year  = {2015},

date = {2015-01-01},

journal = {Journal of the Royal Society interface},

volume = {12},

number = {103},

pages = {20141203},

note = {DOI: 10.1098/rsif.2014.1203},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/220750b,

title = {The efficient interaction of costly punishment and commitment},

author = {The Anh T. A. H. Han and Tom Lenaerts},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/220750},

year  = {2015},

date = {2015-01-01},

journal = {Proceedings of the International Joint Conference on Autonomous Agents and Multiagent Systems, AAMAS},

volume = {3},

pages = {1657-1658},

note = {Language of publication: en},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/226810b,

title = {Cross-biome comparison of microbial association networks},

author = {Karoline Faust and Gipsi Lima Mendez and Jean-Sébastien Lerat and Jarupon Fah Sathirapongsasuti and Rob Knight and Curtis Huttenhower and Tom Lenaerts and Jeroen JR Raes},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/226810},

year  = {2015},

date = {2015-01-01},

journal = {Frontiers in microbiology},

volume = {6},

number = {OCT},

note = {DOI: 10.3389/fmicb.2015.01200},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/198531b,

title = {An approach for the evaluation of human activities in physical therapy scenarios},

author = {M. P. M. P. Cuellar and Maria Ros and Maria J Martin Bautista and Yann-A"el Le Borgne and Gianluca Bontempi},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/198531},

year  = {2015},

date = {2015-01-01},

journal = {Lecture notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering},

volume = {141},

pages = {401-414},

note = {DOI: 10.1007/978-3-319-16292-8_29},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/217546b,

title = {Integrative Analysis with Monte Carlo Cross-Validation Reveals miRNAs Regulating Pathways Cross-Talk in Aggressive Breast Cancer},

author = {Antonio Colaprico and Claudia Cava and Gloria Bertoli and Gianluca Bontempi and Isabella Castiglioni},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/217546},

year  = {2015},

date = {2015-01-01},

journal = {BioMed Research International},

volume = {2015},

note = {DOI: 10.1155/2015/831314},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/237086b,

title = {When is undersampling effective in unbalanced classification tasks?},

author = {Andrea Dal Pozzolo and Olivier Caelen and Gianluca Bontempi},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/237086},

year  = {2015},

date = {2015-01-01},

journal = {Lecture notes in computer science},

volume = {9284},

pages = {200-215},

note = {DOI: 10.1007/978-3-319-23528-8_13},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/222900b,

title = {From dependency to causality: a machine learning approach},

author = {Gianluca Bontempi and Maxime Flauder},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/222900},

year  = {2015},

date = {2015-01-01},

journal = {Journal of machine learning research},

note = {Language of publication: en},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{info:hdl:2013/226800b,

title = {Template attacks vs. Machine learning revisited (and the curse of dimensionality in side-channel analysis)},

author = {Liran Lerman and Romain Poussier and Gianluca Bontempi and Olivier Markowitch and Franccois-Xavier Standaert},

url = {http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/226800},

year  = {2015},

date = {2015-01-01},

journal = {Lecture notes in computer science},

volume = {9064},

pages = {20-33},

note = {DOI: 10.1007/978-3-319-21476-4_2},

keywords = {},

pubstate = {published},

tppubtype = {article}

}