Complete List of Works

61 entries « 2 of 2 »

2018

Gazzo, Andrea

Beyond monogenic diseases: a first collection and analysis of digenic diseases PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Carcillo, Fabrizio

Beyond Supervised Learning in Credit Card Fraud Detection: A Dive into Semi-supervised and Distributed Learning PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Bizet, Martin

Bioinformatic inference of a prognostic epigenetic signature of immunity in breast cancers PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Fimereli, Danai

Computational analyses of gene fusions, viruses and parasitic genomic elements in breast cancer PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Gazzo, Andrea

Beyond monogenic diseases: a first collection and analysis of digenic diseases PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Reggiani, Claudio

Bioinformatic discovery of novel exons expressed in human brain and their association with neurodevelopmental disorders PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Fimereli, Danai

Computational analyses of gene fusions, viruses and parasitic genomic elements in breast cancer PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Dierckxsens, Nicolas

Targeted organelle genome assembly and heteroplamsy detection PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Carcillo, Fabrizio

Beyond Supervised Learning in Credit Card Fraud Detection: A Dive into Semi-supervised and Distributed Learning PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Porretta'S, Luciano

MODELS AND METHODS IN GENOME WIDE ASSOCIATION STUDIES PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | BibTeX

Bizet, Martin

Bioinformatic inference of a prognostic epigenetic signature of immunity in breast cancers PhD Thesis

2018, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

61 entries « 2 of 2 »
79 entries « 2 of 2 »

2017

Fernandez-Domingos, Elias; Burguillo-Rial, Juan C; Lenaerts, Tom

Reactive Versus Anticipative Decision Making in a Novel Gift-Giving Game Miscellaneous

2017, (Conference: 29nd Benelux conference on Artificial Intelligence(28-29 nov 2017: Groningen)).

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Reggiani, Claudio; Coppens, Sandra; Sekhara, Tayeb; Dimov, Ivan; Pichon, Bruno; Lufin, Nicolas; Addor, Marie Claude; Belligni, Elga Fabia; Digilio, Maria Cristina; Faletra, Flavio; Ferrero, Giovanni Battista; Gerard, Marion; Isidor, Bertrand; Joss, Shelagh; Niel-Bütschi, Florence; Perrone, Maria Dolores; Petit, Florence; Renieri, Alessandra; Romana, Serge; Topa, Alexandra; Vermeesch, Joris Robert; Lenaerts, Tom; Casimir, Georges; Abramowicz, Marc; Bontempi, Gianluca; Vilain, Catheline; Deconinck, Nicolas; Smits, Guillaume

Novel promoters and coding first exons in DLG2 linked to developmental disorders and intellectual disability. Journal Article

In: Genome medicine, 9 (1), pp. 67, 2017, (DOI: 10.1186/s13073-017-0452-y).

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Lipski, D; Dewispelaere, Remi; Foucart, Vincent; Caspers, Laure; Defrance, Matthieu; Bruyns, Catherine; Willermain, Francois

MHC class II expression and potential antigen-presenting cells in the retina during experimental autoimmune uveitis Journal Article

In: Journal of neuroinflammation, 14 (1), 2017, (DOI: 10.1186/s12974-017-0915-5).

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López-Ferrando, Víctor; Gazzo, Andrea; Cruz, Xavier De La; Orozco, Modesto; Gelpí, Josep Ll

PMut: A web-based tool for the annotation of pathological variants on proteins, 2017 update Journal Article

In: Nucleic acids research, 45 (W1), pp. W222-W228, 2017, (DOI: 10.1093/nar/gkx313).

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Han, The Anh T A H; Pereira, Luís Moniz; Martinez-Vaquero, Luis L A; Lenaerts, Tom

Centralized vs. Personalized Commitments and their influence on Cooperation in Group Interactions Inproceedings

In: Proceedings of the 31st AAAI Conference on Artificial Intelligence (AAAI-17), 2017, (Conference: 31st AAAI Conference on Artificial Intelligence (AAAI-17)(4-9 February 2017: San Francisco, USA)).

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Orlando, Gabriele; Raimondi, Daniele; Khanna, T; Lenaerts, Tom; Vranken, Wim F

SVM-dependent pairwise HMM: an application to Protein pairwise alignments. Journal Article

In: Bioinformatics, 2017, (DOI: 10.1093/bioinformatics/btx391).

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Fernandez-Domingos, Elias; Burguillo-Rial, Juan C; Lenaerts, Tom

Reactive Versus Anticipative Decision Making in a Novel Gift-Giving Game Inproceedings

In: Proceedings of the 31st AAAI Conference on Artificial Intelligence (AAAI-17), 2017, (Conference: 31st AAAI Conference on Artificial Intelligence (AAAI-17)(4-9 February 2017: San Francisco, USA)).

Links | BibTeX

Martinez-Vaquero, Luis L A; Han, The Anh T A H; Pereira, Luís Moniz; Lenaerts, Tom

When agreement-accepting free-riders are a necessary evil for the evolution of cooperation. Journal Article

In: Scientific reports, 7 (1), pp. 2478, 2017, (DOI: 10.1038/s41598-017-02625-z).

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Fernandez-Domingos, Elias; Burguillo-Rial, Juan C; Nowe, Ann; Lenaerts, Tom

Coordinating Human and Agent Behavior in Collective-Risk Scenarios Inproceedings

In: Proceedings of the 31st AAAI Conference on Artificial Intelligence (AAAI-17), 2017, (Conference: 31st AAAI Conference on Artificial Intelligence (AAAI-17)(4-9 February 2017: San Francisco, USA)).

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Pham, Ngoc Cam; Haibe-Kains, Benjamin; Bellot, Pau; Bontempi, Gianluca; Meyer, Patrick E

Study of Meta-analysis strategies for network inference using information-theoretic approaches Journal Article

In: BioData Mining, 10 (1), 2017, (DOI: 10.1186/s13040-017-0136-6).

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Pereira, Luís Moniz; Lenaerts, Tom; Martinez-Vaquero, Luis L A; Han, The Anh T A H

Social manifestation of guilt leads to stable cooperation in multi-agent systems Journal Article

In: Proceedings of the International Joint Conference on Autonomous Agents and Multiagent Systems, AAMAS, 3 , pp. 1421-1430, 2017, (Language of publication: en).

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Han, The Anh T A H; Pereira, Luís Marcelo; Lenaerts, Tom

Commitment and participation in public goods games Journal Article

In: Proceedings of the International Joint Conference on Autonomous Agents and Multiagent Systems, AAMAS, 3 , pp. 1431-1432, 2017, (Language of publication: en).

Links | BibTeX

Pham, Ngoc Cam; Haibe-Kains, Benjamin; Bellot, Pau; Bontempi, Gianluca; Meyer, Patrick E

Study of Meta-analysis Strategies for Network Inference Using Information-Theoretic Approaches Journal Article

In: Proceedings - International Workshop on Database and Expert Systems Applications, pp. 76-83, 2017, (DOI: 10.1109/DEXA.2016.030).

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Pozzolo, Andrea Dal; Boracchi, Giacomo; Caelen, Olivier; Alippi, Cesare; Bontempi, Gianluca

Credit Card Fraud Detection: A Realistic Modeling and a Novel Learning Strategy Journal Article

In: IEEE Transactions on Neural Networks and Learning Systems, 99 , 2017, (DOI: 10.1109/TNNLS.2017.2736643).

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Xu, Taosheng; Le, Thuc Duy; Liu, Lin; Su, Ning; Wang, Rujing; Sun, Bingyu; Colaprico, Antonio; Bontempi, Gianluca; Li, Jiuyong

CancerSubtypes: An R/Bioconductor package for molecular cancer subtype identification, validation and visualization Journal Article

In: Bioinformatics, 33 (19), pp. 3131-3133, 2017, (DOI: 10.1093/bioinformatics/btx378).

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Garaud, Soizic; Roufosse, Florence; Silva, Pushpamali De; Gu-Trantien, Chunyan; Lodewyckx, Jean Nicolas; Duvillier, Hugues; Dedeurwaerder, Sarah; Bizet, Martin; Defrance, Matthieu; cc, Fran; cc, Fran; Willard-Gallo, Karen

FOXP1 is a regulator of quiescence in healthy human CD4+ T cells and is constitutively repressed in T cells from patients with lymphoproliferative disorders Journal Article

In: European Journal of Immunology, 47 (1), pp. 168-179, 2017, (DOI: 10.1002/eji.201646373).

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Bontempi, Gianluca; "e, Yann-A; Stefani, Jacopo De

A Dynamic Factor Machine Learning Method for Multi-variate and Multi-step-Ahead Forecasting Inproceedings

In: 2017 IEEE International Conference on Data Science and Advanced Analytics (DSAA), pp. 222-231, 2017, (DOI: 10.1109/DSAA.2017.1).

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Jansen, Maarten; Amghar, Mohamed

Multiscale Local Polynomial Decompositions using bandwidths as scales Journal Article

In: Statistics and computing, 27 (5), pp. 1383-1399, 2017, (DOI: 10.1007/s11222-016-9692-8).

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Lenaerts, Tom; Han, The Anh T A H; Pereira, Luis Moniz; Martinez-Vaquero, Luis A

When apology is sincere, cooperation evolves, even when mistakes occur frequently Inproceedings

In: Proceedings of the AISB Annual Convention, Symposium on Computational Modelling of Emotion: Theory and Applications, pp. 193-195, 2017, (Language of publication: en).

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Raimondi, Daniele; Orlando, Gabriele; Messens, Joris; Vranken, Wim

Investigating the Molecular Mechanisms Behind Uncharacterized Cysteine Losses from Prediction of Their Oxidation State Journal Article

In: Human mutation, 38 (1), pp. 86-94, 2017, (DOI: 10.1002/humu.23129).

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Han, The Anh T A H; Pereira, Luís Moniz; Martinez-Vaquero, Luis A; Lenaerts, Tom

Evolution of commitment and level of participation in public goods games. Inproceedings

In: Proceedings of the 16th International Conference on Autonomous Agents and Multiagent Systems (AAMAS), pp. 1431-1432, 2017, (Language of publication: en).

Links | BibTeX

Pereira, Luis Moniz; Lenaerts, Tom; Martinez-Vaquero, Luis A; others,

Social manifestation of guilt leads to stable cooperation in multi-agent systems Inproceedings

In: Proceedings of the 16th Conference on Autonomous Agents and MultiAgent Systems(AAMAS), pp. 1422-1430, 2017, (Language of publication: en).

Links | BibTeX

Pereira, Luis Moniz; Lenaerts, Tom; Han, The Anh T A H; Martinez-Vaquero, Luis A

Evolutionary Game Theory Modelling of Guilt Inproceedings

In: Proceedings of the AISB Annual Convention, Symposium on Computational Modelling of Emotion: Theory and Applications, pp. 189-192, 2017, (Language of publication: en).

Links | BibTeX

Stefani, Jacopo De; Caelen, Olivier; Hattab, Dalila; Bontempi, Gianluca

Machine Learning for Multi-step Ahead Forecasting of Volatility Proxies Inproceedings

In: 2nd Workshop on MIning DAta for financial applicationS (MIDAS), pp. 17-28, 2017, (Conference: MIDAS 2017(Skopje, Macedonia)).

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Amghar, Mohamed

Multiscale local polynomial transforms in smoothing and density estimation PhD Thesis

2017, (Funder: Universite Libre de Bruxelles).

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Raimondi, Daniele

The effect of genome variation on human proteins: understanding variants and improving their deleteriousness prediction through extensive contextualisation PhD Thesis

2017, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Brown, David Norman

Application of phylogenetic inference methods to quantify intra-tumour heterogeneity and evolution of breast cancers PhD Thesis

2017, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Devooght, Robin

Similarity measures on graphs and novel methods for collaborative filtering PhD Thesis

2017, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Raimondi, Daniele

The effect of genome variation on human proteins: understanding variants and improving their deleteriousness prediction through extensive contextualisation PhD Thesis

2017, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

79 entries « 2 of 2 »
73 entries « 2 of 2 »

2016

Han, The Anh T A H; Pereira, Luís Moniz; Lenaerts, Tom

Emergence of Cooperation in Group Interactions: Avoidance versus Restriction Inproceedings

In: The 2016 AAAI Spring Symposium Series: Technical Reports, 2016, (Conference: AAAI Spring Symposium on “Ethical and Moral Considerations in Non-Human Agents”(21-23 March 2016: Stanford, USA)).

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Świderska, Ewelina; Łasisz, Jakub; Byrski, Aleksander; Lenaerts, Tom; Samson, Dana; Indurkhya, Bipin; Nowe, Ann; Kisiel-Dorohinicki, Marek

Measuring diversity of socio-cognitively inspired ACO search Journal Article

In: Lecture notes in computer science, 9597 , pp. 393-408, 2016, (DOI: 10.1007/978-3-319-31204-0_26).

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Bugajski, Iwan; Listkiewicz, Piotr; Byrski, Aleksander; Kisiel-Dorohinicki, Marek; Korczynski, Wojciech; Lenaerts, Tom; Samson, Dana; Indurkhya, Bipin; Nowe, Ann

Enhancing particle swarm optimization with socio-cognitive inspirations Journal Article

In: Procedia Computer Science, 80 , pp. 804-813, 2016, (DOI: 10.1016/j.procs.2016.05.370).

Links | BibTeX

Martinez-Vaquero, Luis L A; Gruji'c, Jelena; Lenaerts, Tom

Equivalence of cooperation indexes: Comment on Universal scaling for the dilemma strength in evolutionary games by Z. Wang et al. Journal Article

In: Physics of life reviews, 16 , pp. 196-197, 2016, (DOI: 10.1016/j.plrev.2015.07.005).

Links | BibTeX

Han, The Anh T A H; Pereira, Luís Moniz; Lenaerts, Tom

Evolution of commitment and level of participation in public goods games Journal Article

In: Autonomous agents and multi-agent systems, pp. 24, 2016, (DOI: 10.1007/s10458-016-9338-4).

Links | BibTeX

Bugajski, Iwan; Byrski, Aleksander; Kisiel-Dorohinicki, Marek; Lenaerts, Tom; Samson, Dana; Indurkhya, Bipin

Adaptation of Population Structure in Socio-cognitive Particle Swarm Optimization Journal Article

In: Procedia Computer Science, 101 , pp. 177-186, 2016, (DOI: 10.1016/j.procs.2016.11.022).

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Silva, Tiago T C; Colaprico, Antonio; Olsen, Catharina; D'Angelo, Fulvio; Bontempi, Gianluca; Ceccarelli, Michele; Noushmehr, Houtan

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages [version 1; referees: 1 approved, 1 approved with reservations] Journal Article

In: F1000Research, 5 , 2016, (DOI: 10.12688/F1000RESEARCH.8923.1).

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"e, Yann-A; Homolova, Adriana; Bontempi, Gianluca

OpenTED browser: Insights into European Public Spendings Journal Article

In: CEUR Workshop Proceedings, 1831 , 2016, (Language of publication: en).

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Bontempi, Gianluca

A blocking strategy for ranking features according to probabilistic relevance Journal Article

In: Lecture notes in computer science, 10122 LNCS , pp. 59-69, 2016, (DOI: 10.1007/978-3-319-51469-7_5).

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Delatte, Benjamin; Wang, Feifei; Ngoc, Long Vo; Collignon, Evelyne; Bonvin, Elise; Deplus, Rachel; Calonne, Emilie; Hassabi, Bouchra; Putmans, Pascale; Awe, Stephan; Wetzel, Collin; Kreher, Judith; Soin, Romuald; Creppe, Catherine; Limbach, Patrick A; Gueydan, Cyril; Kruys, Véronique; Brehm, A; Minakhina, Svetlana; Defrance, Matthieu; Steward, Ruth; cc, Fran

Transcriptome-wide distribution and function of RNA hydroxymethylcytosine Journal Article

In: Science, 351 (6270), pp. 282-285, 2016, (DOI: 10.1126/science.aac5253).

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Brenner, Carmen; Luciani, Judith; Bizet, Martin; Ndlovu, Matladi N; Josseaux, Eléonore; Dedeurwaerder, Sarah; Calonne, Emilie; Putmans, Pascale; Cartron, Pierre Francois; Defrance, Matthieu; cc, Fran; Deplus, Rachel

The interplay between the lysine demethylase KDM1A and DNA methyltransferases in cancer cells is cell cycle dependent Journal Article

In: Oncotarget, 7 (37), pp. 58939-58952, 2016, (DOI: 10.18632/oncotarget.10624).

Links | BibTeX

Jansen, Maarten

Non-equispaced B-spline wavelets Journal Article

In: International Journal of Wavelets, Multiresolution and Information Processing, 14 (6), 2016, (DOI: 10.1142/S0219691316500569).

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Wit, Nathalie De; Lenaerts, Tom

Cluster analysis of neurodevelopmental diseases with Spark. Informatique Masters Thesis

2016, (Language of publication: fr).

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Steckelmacher, Denis; Lenaerts, Tom

Reinforcement learning in complex environments: Evaluating algorithms on image classification. Informatique Masters Thesis

2016, (Language of publication: fr).

Links | BibTeX

Velde, Thibaut Van De; Lenaerts, Tom

Concevoir un mod`ele de jeu `a ressources communes au sein d'un cloud. Informatique Masters Thesis

2016, (Language of publication: fr).

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Zisis, Ioannis

The Effect of Group Formation on Behaviour: An Experimental and Evolutionary Analysis PhD Thesis

2016, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Wit, Nathalie De; Lenaerts, Tom

Cluster analysis of neurodevelopmental diseases with Spark. Informatique Masters Thesis

2016, (Language of publication: fr).

Links | BibTeX

Steckelmacher, Denis; Lenaerts, Tom

Reinforcement learning in complex environments: Evaluating algorithms on image classification. Informatique Masters Thesis

2016, (Language of publication: fr).

Links | BibTeX

Velde, Thibaut Van De; Lenaerts, Tom

Concevoir un mod`ele de jeu `a ressources communes au sein d'un cloud. Informatique Masters Thesis

2016, (Language of publication: fr).

Links | BibTeX

Tomás, Gil Da Rocha

Gene Expression Markers of Proliferation and Differentiation in Cancer & The Extent of Prognostic Signals in the Cancer Transcriptome PhD Thesis

2016, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Tarabichi, Maxime

Integrative analyses of genome-wide transcriptomic and genomic thyroid cancer profiles PhD Thesis

2016, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Zisis, Ioannis

The Effect of Group Formation on Behaviour: An Experimental and Evolutionary Analysis PhD Thesis

2016, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Tarabichi, Maxime

Integrative analyses of genome-wide transcriptomic and genomic thyroid cancer profiles PhD Thesis

2016, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

73 entries « 2 of 2 »
111 entries « 2 of 3 »

2015

Pozzolo, Andrea Dal; Caelen, Olivier; Johnson, Reid; Bontempi, Gianluca

Calibrating Probability with Undersampling for Unbalanced Classification Inproceedings

In: 2015 IEEE Symposium on Computational Intelligence and Data Mining, 2015, (Language of publication: en).

Links | BibTeX

Zisis, Ioannis; Guida, Sibilla Di; Han, The Anh T A H; Kirchsteiger, Georg; Lenaerts, Tom

Receivers’ acceptance drives the generosity of dictators in a dictator game with partner selection Miscellaneous

2015, (Conference: Student Conference on Complexity Science(9-11 September 2015: Granada, Spain)).

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Zisis, Ioannis; Guida, Sibilla Di; Han, The Anh T A H; Kirchsteiger, Georg; Lenaerts, Tom

An experimental and evolutionary analysis of group formation and gift giving Miscellaneous

2015, (Conference: Conference on Complex Systems(28 September - 2 October 2015: Tempe, USA)).

Links | BibTeX

Zisis, Ioannis; Guida, Sibilla Di; Han, The Anh T A H; Kirchsteiger, Georg; Lenaerts, Tom

Receivers’ acceptance drives the generosity of dictators in a dictator game with partner selection Miscellaneous

2015, (Conference: Physics Meets the Social Science, Granada Seminar on Computational and Statistical Physics(15-19 june 2015: La Herradura, Spain)).

Links | BibTeX

Martinez-Vaquero, Luis L A; Han, The Anh T A H; Pereira, Luís Moniz; Lenaerts, Tom

Emergence of revenge and forgiveness in commitments Miscellaneous

2015, (Conference: Physics Meets the Social Science, Granada Seminar on Computational and Statistical Physics(15-19 June 2015: La Herradura, Spain)).

Links | BibTeX

Gazzo, Andrea; Daneels, Dorien; Smits, Guillaume; Dooren, Sonia Van; Cilia, Elisa; Lenaerts, Tom

DIDA - A first digenic diseases database Miscellaneous

2015, (Conference: 15th Annual Meeting of the Belgian Society of Human Genetics(6 May 2015: Charleroi, Belgium)).

Links | BibTeX

Conard, Ashley M; Cilia, Elisa; Lenaerts, Tom

Determining the winning SH3 coalition: how cooperative game theory reveals the importance of domain residues in peptide binding Miscellaneous

2015, (Conference: The 23rd Annual International Conference on Intelligent Systems for Molecular Biology and the 14th European Conference on Computational Biology(10-14 July 2015: Dublin, ireland)).

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Gazzo, Andrea; Daneels, Dorien; Bonduelle, Maryse; Dooren, Sonia Van; Smits, Guillaume; Lenaerts, Tom

Predicting oligogenic effects using digenic disease data Miscellaneous

2015, (Conference: 10th BeNeLux Bioinformatics Conference(7-8 December 2015: Antwerp, Belgium)).

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Daneels, Dorien; Gazzo, Andrea; Bonduelle, Maryse; Smits, Guillaume; Cilia, Elisa; Lenaerts, Tom; Dooren, Sonia Van

DIDA: a first database on digenic diseases Miscellaneous

2015, (Conference: VUB DS-LSM PhD day(31 March 2015: Jette, Belgium)).

Links | BibTeX

Gazzo, Andrea; Daneels, Dorien; Smits, Guillaume; Dooren, Sonia Van; Cilia, Elisa; Lenaerts, Tom

DIDA - A first digenic diseases database Miscellaneous

2015, (Conference: Cold Spring Harbor Laboratory conference on Genome Informatics(28-31 October 2015: Cold Spring Harbor, USA)).

Links | BibTeX

Huculeci, Radu; Cilia, Elisa; Buts, Lieven; Houben, Klaartje; van Nuland, Nico A J; Lenaerts, Tom

SH2 sidechain dynamics may be key to unlock kinase activity Miscellaneous

2015, (Conference: Keystone symposium - The Biological Code of Cell Signaling: A Tribute to Tony Pawson(11-15 january 2015: Steamboat springs, Colorado, USA)).

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Ruano, Ana Zafra; Cilia, Elisa; Couceiro, José JR; Sanz, Javier Ruiz; Schymkowitz, Joost J; Rousseau, Frédéric; Luque, Irene; Lenaerts, Tom

On the evolutionary conservation of the dynamic changes predicted for a collection of SH3 domain structures Miscellaneous

2015, (Conference: Keystone symposium - The Biological Code of Cell Signaling: A Tribute to Tony Pawson(11-16 January 2015: Steamboat springs, Colorado, USA)).

Links | BibTeX

Lenaerts, Tom

Bits and bytes of protein domain communication Miscellaneous

2015, (Conference: International Conference on Emergence in Chemical Systems(21-27 june 2015: Anchorage, USA)).

Links | BibTeX

Lenaerts, Tom

To apologize or not to apologize; the evolutionary viability of forgiveness in interrupted commitments in the iterated prisoners dilemma Miscellaneous

2015, (Conference: French Symposium on Games(26-30 May 2015: Paris, France)).

Links | BibTeX

Lenaerts, Tom

Commitment to cooperate - the evolutionary viability of individual and group commitments in social dilemmas Miscellaneous

2015, (Conference: Granada Seminar on Computational and Statistical Physics(15-19 june 2015: La Herradura, Spain)).

Links | BibTeX

Pozzolo, Andrea Dal; Caelen, Olivier; Johnson, Reid; Bontempi, Gianluca

Calibrating Probability with Undersampling for Unbalanced Classification Inproceedings

In: 2015 IEEE Symposium on Computational Intelligence and Data Mining, 2015, (Language of publication: en).

Links | BibTeX

Pozzolo, Andrea Dal; Boracchi, Giacomo; Caelen, Olivier; Alippi, Cesare; Bontempi, Gianluca

Credit Card Fraud Detection and Concept-Drift Adaptation with Delayed Supervised Information Inproceedings

In: Neural Networks (IJCNN), 2015 International Joint Conference on, 2015, (DOI: 10.1109/IJCNN.2015.7280527).

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Huculeci, Radu; Garcia-Pino, Abel; Buts, Lieven; Lenaerts, Tom; van Nuland, Nico A J

Structural insights into the intertwined dimer of fyn SH2. Journal Article

In: Protein science, 24 (12), pp. 1964-1978, 2015, (DOI: 10.1002/pro.2806).

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Zisis, Ioannis; Guida, Sibilla Di; Han, The Anh T A H; Kirchsteiger, Georg; Lenaerts, Tom

Generocity motivated by acceptance - evolutionary analysis of an anticipation game Journal Article

In: Scientific Reports, 5 , 2015, (Language of publication: en).

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Colaprico, Antonio; Silva, Tiago Da; Olsen, Catharina; Garofano, Luciano; Cava, Claudia; Garolini, Davide; Sabedot, Thais TS; Malta, Tathiane TM; Pagnotta, Stefano SM; Castiglioni, Isabella; Ceccarelli, M; Bontempi, Gianluca; Noushmehr, Houtan

TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data. Journal Article

In: Nucleic acids research, 2015, (DOI: 10.1093/nar/gkv1507).

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Lerman, Liran; Bontempi, Gianluca; Markowitch, Olivier

The bias–variance decomposition in profiled attacks Journal Article

In: Journal of Cryptographic Engineering, 5 (4), pp. 255-267, 2015, (DOI: 10.1007/s13389-015-0106-1).

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Abdulkarim, Baroj; Nicolino, Marc; Esteve, Mariana Igoillo; Daures, Mathilde; Romero, Sophie; Philippi, Anne; Senée, Valérie; Lopes, Miguel; Cunha, Daniel Andrade Da; Harding, Heather P; Derbois, Céline; Bendelac, Nathalie; Hattersley, Andrew T; Eizirik, Decio; Ron, David; Cnop, Miriam; Julier, Cécile

A Missense Mutation in PPP1R15B Causes a Syndrome Including Diabetes, Short Stature, and Microcephaly. Journal Article

In: Diabetes (New York, N.Y.), 64 (11), pp. 3951-3962, 2015, (DOI: 10.2337/db15-0477).

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de la de Ryhove, Laurence Kethulle; Ansseau, Eugénie; Nachtegael, Charlotte; Pieters, Karlien; Vanderplanck, Céline; Geens, Marcel; Sermon, Karen; Wilton, Stephen B; Coppee, Frédérique; Lagneaux, Laurence; Belayew, Alexandra

The Role of D4Z4-Encoded Proteins in the Osteogenic Differentiation of Mesenchymal Stromal Cells Isolated from Bone Marrow. Journal Article

In: Stem cells and development, 24 (22), pp. 2674-2686, 2015, (DOI: 10.1089/scd.2014.0575).

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Gazzo, Andrea; Daneels, Dorien; Cilia, Elisa; Bonduelle, Maryse; Abramowicz, Marc; Dooren, Sonia Van; Smits, Guillaume; Lenaerts, Tom

DIDA: A curated and annotated digenic diseases database. Journal Article

In: Nucleic acids research, 2015, (DOI: 10.1093/nar/gkv1068).

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Han, The Anh T A H; Pereira, Luís Moniz; Santos, Francisco C; Lenaerts, Tom

Emergence of cooperation via intention recognition, commitment and apology-A research summary Journal Article

In: AI communications, 28 (4), pp. 709-715, 2015, (DOI: 10.3233/AIC-150672).

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Bellot, Pau; Olsen, Catharina; Salembier, Philippe; Oliveras-Vergés, Albert; Meyer, Patrick E

NetBenchmark: A bioconductor package for reproducible benchmarks of gene regulatory network inference Journal Article

In: BMC bioinformatics, 16 (1), 2015, (DOI: 10.1186/s12859-015-0728-4).

Links | BibTeX

Delatte, Benjamin; Jeschke, Jana; Defrance, Matthieu; Bachman, Martin; Creppe, Catherine; Calonne, Emilie; Bizet, Martin; Deplus, Rachel; Marroquí, Laura; Libin, Myriam; Ravichandran, Mirunalini; cc, Fran; Eizirik, Decio L; Murrell, Adele; Jurkowski, Tomasz Piotr; cc, Fran

Genome-wide hydroxymethylcytosine pattern changes in response to oxidative stress. Journal Article

In: Scientific reports, 5 , pp. 12714, 2015, (DOI: 10.1038/srep12714).

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Lerman, Liran; Poussier, Romain; Bontempi, Gianluca; Markowitch, Olivier; cc, Fran

Template attacks vs Machine Learning Revisited Journal Article

In: Lecture notes in computer science, 9064 , pp. 20-33, 2015, (Language of publication: en).

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Larsimont, Jean-Christophe; Kass, Youssef Khalil; Danes, Adriana Sanchez; Sukumaran, Vijayakumar; Defrance, Matthieu; Delatte, Benjamin; Liagre, Mélanie; Baatsen, Pieter; Marine, Jean-Christophe; Lippens, Saskia; Guerin, Christopher; Marmol, Véronique Del; Vanderwinden, Jean-Marie; cc, Fran; Blanpain, Cédric

Sox9 Controls Self-Renewal of Oncogene Targeted Cells and Links Tumor Initiation and Invasion. Journal Article

In: Cell stem cell, 17 (1), pp. 60-73, 2015, (DOI: 10.1016/j.stem.2015.05.008).

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Raimondi, Daniele; Orlando, Gabriele; Vranken, Wim

An evolutionary view on Disulfide bond connectivities prediction using phylogenetic trees and a simple cysteine mutation model Journal Article

In: PloS one, 10 (7), 2015, (DOI: 10.1371/journal.pone.0131792).

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Martinez-Vaquero, Luis L A; Han, The Anh T A H; Pereira, Luís Marcelo; Lenaerts, Tom

Apology and forgiveness evolve to resolve failures in cooperative agreements Journal Article

In: Scientific reports, 5 , 2015, (DOI: 10.1038/srep10639).

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Olsen, Catharina; Fleming, Kathleen; Prendergast, Niall; Rubio, Renee; Emmert-Streib, Frank; Bontempi, Gianluca; Quackenbush, John; Haibe-Kains, Benjamin

Using shRNA experiments to validate gene regulatory networks Journal Article

In: Genomics Data, 4 , pp. 123-126, 2015, (DOI: 10.1016/j.gdata.2015.03.011).

Links | BibTeX

Lerman, Liran; Bontempi, Gianluca; Markowitch, Olivier

A machine learning approach against a masked AES: Reaching the limit of side-channel attacks with a learning model Journal Article

In: Journal of Cryptographic Engineering, 5 (2), pp. 123-139, 2015, (DOI: 10.1007/s13389-014-0089-3).

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Brozzi, Flora; Nardelli, Tarlliza R; Lopes, Miguel; Millard, Isabelle; Barthson, Jenny; Esteve, Mariana Igoillo; Grieco, Fabio Arturo; Villate, Olatz; Oliveira, Joana Moitinho Oitinho J M; Casimir, Marina; Bugliani, Marco; Engin, Feyza; Hotamisligil, Gökhan S; Marchetti, Piero; Eizirik, Decio L

Cytokines induce endoplasmic reticulum stress in human, rat and mouse beta cells via different mechanisms Journal Article

In: Diabetologia, 58 (10), pp. 2307-2316, 2015, (DOI: 10.1007/s00125-015-3669-6).

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Mendez, Gipsi Lima; Faust, Karoline; Henry, Lynn N; Decelle, Johan; Colin, Simon; Carcillo, Fabrizio; Chaffron, Samuel; Ignacio-Espinosa, Cesar JC; Roux, Simon; Vincent, Flora; Bittner, Lucie; Darzi, Youssef; Wang, Jun; Audic, Stéphane; Berline, Léo; Bontempi, Gianluca; Cabello, Ana AM; Coppola, Laurent; Cornejo-Castillo, Francisco FM; d'Ovidio, Francesco; Meester, Luc De; Ferrera, Isabel; Garet-Delmas, Marie-José; Guidi, Lionel; Lara, Elena; Pesant, Stéphane; Royo-Llonch, Marta; Salazar, Guillem; Sanchez, Paloma; Sebastian, Marta; Souffreau, Caroline; Dimier, Céline; Picheral, Marc; Searson, Sarah; Kandels-Lewis, Stefanie; coordinators, Tara Oceans; Gorsky, Gabriel; Not, Fabrice; Ogata, Hiroyuki; Speich, Sabrina; Stemmann, Lars; Weissenbach, Jean; Wincker, Patrick; Acinas, Silvia SG; Sunagawa, Shinichi; Bork, Peer; Sullivan, Matthew B; Karsenti, Eric; Bowler, Chris; de Vargas, Colomban; Raes, Jeroen JR

Ocean plankton. Determinants of community structure in the global plankton interactome. Journal Article

In: Science, 348 (6237), pp. 1262073, 2015, (DOI: 10.1126/science.1262073).

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Uribe-Lewis, Santiago; Stark, Rory; Carroll, Thomas; Dunning, Mark J; Bachman, Martin; Ito, Yoko; Stojic, Lovorka; Halim, Silvia; Vowler, Sarah L; Lynch, Andy G; Delatte, Benjamin; de Bony, Eric James; Colin, Laurence; Defrance, Matthieu; Krueger, Felix; Silva, Ana Luisa; ten Hoopen, Rogier; Ibrahim, Ashraf Ek; Murrell, Adele; cc, Fran

5-hydroxymethylcytosine marks promoters in colon that resist DNA hypermethylation in cancer. Journal Article

In: Genome biology, 16 , pp. 69, 2015, (DOI: 10.1186/s13059-015-0605-5).

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Raimondi, Daniele; Orlando, Gabriele; Vranken, Wim

Clustering-based model of cysteine co-evolution improves disulfide bond connectivity prediction and reduces homologous sequence requirements Journal Article

In: Bioinformatics, 31 (8), pp. 1219-1225, 2015, (DOI: 10.1093/bioinformatics/btu794).

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cc, Fran; Jeschke, Jana; Defrance, Matthieu; Desmedt, Christine; Bizet, Martin; Sotiriou, Christos

BREAST CANCER EPIGENETIC MARKERS USEFUL IN ANTHRACYCLINE TREATMENT PROGNOSIS Miscellaneous

2015, (Language of publication: fr).

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Han, The Anh T A H; Santos, Francisco C; Lenaerts, Tom; Pereira, Luís Marcelo

Synergy between intention recognition and commitments in cooperation dilemmas Journal Article

In: Scientific Reports, 5 , 2015, (DOI: 10.1038/srep09312).

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Han, The Anh T A H; Pereira, Luís Moniz; Lenaerts, Tom

Avoiding or restricting defectors in public goods games? Journal Article

In: Journal of the Royal Society interface, 12 (103), pp. 20141203, 2015, (DOI: 10.1098/rsif.2014.1203).

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Sekara, Mateusz; Kowalski, Michael; Byrski, Aleksander; Indurkhya, Bipin; Kisiel-Dorohinicki, Marek; Samson, Dana; Lenaerts, Tom

Multi-pheromone ant Colony Optimization for Socio-cognitive Simulation Purposes Journal Article

In: Procedia Computer Science, 51 , pp. 954-963, 2015, (DOI: 10.1016/j.procs.2015.05.234).

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Han, The Anh T A H; Lenaerts, Tom

The efficient interaction of costly punishment and commitment Journal Article

In: Proceedings of the International Joint Conference on Autonomous Agents and Multiagent Systems, AAMAS, 3 , pp. 1657-1658, 2015, (Language of publication: en).

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Zisis, Ioannis; Guida, Sibilla Di; Han, The Anh T A H; Kirchsteiger, Georg; Lenaerts, Tom

Generosity motivated by acceptance - evolutionary analysis of an anticipation game. Journal Article

In: Scientific reports, 5 , pp. 18076, 2015, (DOI: 10.1038/srep18076).

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Faust, Karoline; Mendez, Gipsi Lima; Lerat, Jean-Sébastien; Sathirapongsasuti, Jarupon Fah; Knight, Rob; Huttenhower, Curtis; Lenaerts, Tom; Raes, Jeroen JR

Cross-biome comparison of microbial association networks Journal Article

In: Frontiers in microbiology, 6 (OCT), 2015, (DOI: 10.3389/fmicb.2015.01200).

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Colaprico, Antonio; Cava, Claudia; Bertoli, Gloria; Bontempi, Gianluca; Castiglioni, Isabella

Integrative Analysis with Monte Carlo Cross-Validation Reveals miRNAs Regulating Pathways Cross-Talk in Aggressive Breast Cancer Journal Article

In: BioMed Research International, 2015 , 2015, (DOI: 10.1155/2015/831314).

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Lopes, Miguel

Inference of gene networks from time series expression data and application to type 1 Diabetes PhD Thesis

2015, (Funder: Universite Libre de Bruxelles).

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Bontempi, Gianluca; Flauder, Maxime

From dependency to causality: a machine learning approach Journal Article

In: Journal of machine learning research, 2015, (Language of publication: en).

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Hoffman, Anthony; Lenaerts, Tom

Live migration of virtual machines in the cloud computing. Informatique Masters Thesis

2015, (Language of publication: fr).

Links | BibTeX

Lerman, Liran; Poussier, Romain; Bontempi, Gianluca; Markowitch, Olivier; cc, Fran

Template attacks vs. Machine learning revisited (and the curse of dimensionality in side-channel analysis) Journal Article

In: Lecture notes in computer science, 9064 , pp. 20-33, 2015, (DOI: 10.1007/978-3-319-21476-4_2).

Links | BibTeX

Pozzolo, Andrea Dal; Caelen, Olivier; Bontempi, Gianluca

When is undersampling effective in unbalanced classification tasks? Journal Article

In: Lecture notes in computer science, 9284 , pp. 200-215, 2015, (DOI: 10.1007/978-3-319-23528-8_13).

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111 entries « 2 of 3 »
898 entries « 2 of 18 »

2014

Dedeurwaerder, Sarah; Defrance, Matthieu; Bizet, Martin; Calonne, Emilie; Bontempi, Gianluca; cc, Fran

A comprehensive overview of Infinium Human Methylation450 data processing Journal Article

In: Briefings in bioinformatics, 15 (6), pp. 929-941, 2014, (DOI: 0.1093/bib/bbt054).

Links | BibTeX

Cilia, Elisa; Teso, Stefano; Ammendola, Sergio; Lenaerts, Tom; Passerini, Andrea

Predicting virus mutations through statistical relational learning. Journal Article

In: BMC bioinformatics, 15 , pp. 309, 2014, (DOI: 10.1186/1471-2105-15-309).

Links | BibTeX

Deplus, Rachel; "i, Lo; Rajavelu, Arumugam; Boukaba, Abdel Halim; Defrance, Matthieu; Luciani, Judith; cc, Fran; Dedeurwaerder, Sarah; `e, Hél; Brinkman, Arie B; Simmer, Femke; Müller, Fabian; Bertin, Benjamin; Berdasco, Maria; Putmans, Pascale; Calonne, Emilie; Litchfield, David DW; Launoit, Yvan De; Jurkowski, Tomasz Piotr; Stunnenberg, Hendrik HG; Bock, Christoph; Sotiriou, Christos; Fraga, Mario F; Esteller, Manel; Jeltsch, Albert; cc, Fran

Regulation of DNA methylation patterns by CK2-mediated phosphorylation of Dnmt3a. Journal Article

In: Cell reports, 8 (3), pp. 743-753, 2014, (DOI: 10.1016/j.celrep.2014.06.048).

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Rubio, Lucia; Huculeci, Radu; Buts, Lieven; Vanwetswinkel, Sophie; Lenaerts, Tom; van Nuland, Nico A J

(1)H, (13)C, and (15)N backbone and side-chain chemical shift assignments of the free and bound forms of the human PTPN11 second SH2 domain. Journal Article

In: Biomolecular N M R Assignments, 8 , 2014, (DOI: 10.1007/s12104-013-9504-4).

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Lerman, Liran; Medeiros, Stéphane Fernandes; Bontempi, Gianluca; Markowitch, Olivier

A Machine Learning Approach Against a Masked AES Journal Article

In: Lecture notes in computer science, 8419 , pp. 61-75, 2014, (Language of publication: en).

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Trepo, Eric; Nahon, Pierre; Bontempi, Gianluca; Valenti, Luca; Falleti, Edmondo; Nischalke, Hans Dieter; Hamza, Samia; Corradini, Stefano Ginanni; Burza, Maria Antonella; Guyot, Erwan; Donati, Benedetta; Spengler, Ulrich; Hillon, Patrick; Toniutto, Pierluigi; Henrion, Jean; Franchimont, Denis; `e, Jacques Devi; Mathurin, Philippe; Moreno, Christophe; Romeo, Stefano; Deltenre, Pierre

Association between the PNPLA3 (rs738409 C>G) variant and hepatocellular carcinoma: Evidence from a meta-analysis of individual participant data. Journal Article

In: Hepatology, 59 (6), pp. 2170-2177, 2014, (DOI: 10.1002/hep.26767).

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Cilia, Elisa; Pancsa, Rita; Tompa, Peter; Lenaerts, Tom; Vranken, Wim

The DynaMine webserver: predicting protein dynamics from sequence. Journal Article

In: Nucleic acids research, 42 , pp. W264-W270, 2014, (DOI: 10.1093/nar/gku270).

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Jansen, Maarten

Information criteria for variable selection under sparsity Journal Article

In: Biometrika, 101 (1), pp. 37-55, 2014, (DOI: 10.1093/biomet/ast055).

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Lenaerts, Tom; Giacobini, Mario; Bersini, Hugues; Bourgine, Paul; Dorigo, Marco; Doursat, René

Special issue for the 20th anniversary of the European conference on artificial life (ECAL 2011): Editorial Journal Article

In: Artificial life, 20 (1), pp. 1-3, 2014, (DOI: 10.1162/ARTL-a-00093).

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Gagliolo, Matteo; Lenaerts, Tom; Jacobs, Dirk

Politics Matters: Dynamics of Inter-organizational Networks among Immigrant Associations Journal Article

In: Studies in Computational Intelligence, 549 , pp. 47-55, 2014, (DOI: 10.1007/978-3-319-05401-8_5).

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Olsen, Catharina; Fleming, Kathleen; Prendergast, Niall; Rubio, Renee; Emmert-Streib, Frank; Bontempi, Gianluca; Haibe-Kains, Benjamin; Quackenbush, John

Inference and validation of predictive gene networks from biomedical literature and gene expression data Journal Article

In: Genomics, 103 , pp. 329-336, 2014, (DOI: 10.1016/j.ygeno.2014.03.004).

Links | BibTeX

Olsen, Catharina; Bontempi, Gianluca; Emmert-Streib, Frank; Quackenbush, John; Haibe-Kains, Benjamin

Relevance of different prior knowledge sources for inferring gene interaction networks Journal Article

In: Frontiers in Genetics, 5 (177), 2014, (DOI: 10.3389/fgene.2014.00177).

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Lopes, Miguel; Kutlu, Burak; Miani, MICHELA; Bang-Berthelsen, Claus H; Størling, Joachim; Pociot, Flemming; Goodman, Nathan; Hood, Lee; Welsh, Nils; Bontempi, Gianluca; Eizirik, Decio L

Temporal profiling of cytokine-induced genes in pancreatic beta-cells by meta-analysis and network inference. Journal Article

In: Genomics, 2014, (DOI: 10.1016/j.ygeno.2013.12.007).

Links | BibTeX

Lerman, Liran; Bontempi, Gianluca; Markowitch, Olivier

Power analysis attack: an approach based on machine learning Journal Article

In: International Journal of Applied Cryptography, 3 (2), pp. 97-115, 2014, (DOI: 10.1504/IJACT.2014.062722).

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Lopes, Miguel; Bontempi, Gianluca

On the null distribution of the precision and recall curve Journal Article

In: Lecture notes in computer science, 8725 LNAI (PART 2), pp. 322-337, 2014, (DOI: 10.1007/978-3-662-44851-9_21).

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Kidzinski, Lukasz

Inference for stationary functional time series: dimension reduction and regression PhD Thesis

2014, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Pozzolo, Andrea Dal; "e, Yann-A; Bontempi, Gianluca; Caelen, Olivier; Waterschoot, Serge

Learned lessons in credit card fraud detection from a practitioner perspective Journal Article

In: Expert systems with applications, 41 (10), pp. 4915-4928, 2014, (DOI: 10.1016/j.eswa.2014.02.026).

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Taieb, Souhaib Ben

Machine learning strategies for multi-step-ahead time series forecasting PhD Thesis

2014, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Milenkovic, Dragan; Berghe, Wim Vanden; Boby, Céline; Leroux, Christine; Declerck, Ken; vel Szic, Katarzyna Szarc; Heyninck, Karen; Laukens, Kris; Bizet, Martin; Defrance, Matthieu; Dedeurwaerder, Sarah; Calonne, Emilie; cc, Fran; Haegeman, Guy; Haenen, Guido R M M G R M M; Bast, Aalt; Weseler, Antje R

Dietary flavanols modulate the transcription of genes associated with cardiovascular pathology without changes in their DNA methylation state. Journal Article

In: PloS one, 9 (4), pp. e95527, 2014, (DOI: 10.1371/journal.pone.0095527).

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Ampe, Eva; Hestir, Erin E L; Bresciani, Mariano; Salvadore, Elga; Brando, Vittorio V E; Dekker, Arnold; Malthus, Tim T J; Jansen, Maarten; Triest, Ludwig; Batelaan, Okke

A wavelet approach for estimating chlorophyll-A from inland waters with reflectance spectroscopy Journal Article

In: IEEE geoscience and remote sensing letters, 11 (1), pp. 89-93, 2014, (DOI: 10.1109/LGRS.2013.2247021).

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Jansen, Maarten

Multiscale local polynomial models for estimation and testing Journal Article

In: Springer Proceedings in Mathematics and Statistics, 74 , pp. 155-166, 2014, (DOI: 10.1007/978-1-4939-0569-0_14).

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Jansen, Maarten

Nonseparable laplacian pyramids with multiscale local polynomials for scattered data Journal Article

In: International Conference on Systems, Signals, and Image Processing, pp. 115-118, 2014, (Language of publication: en).

Links | BibTeX

Boes, Olivier; Lenaerts, Tom

Improving the Needleman-Wunsch algorithm with the Dynamine predictor. Informatique Masters Thesis

2014, (Language of publication: fr).

Links | BibTeX

Wintjens, Florian; Lenaerts, Tom

Machine Learning: Coalition-based naive bayesian classification. Informatique Masters Thesis

2014, (Language of publication: fr).

Links | BibTeX

Estievenart, Quentin; Lenaerts, Tom

Predicting secondary structure with dynamine. Informatique Masters Thesis

2014, (Language of publication: fr).

Links | BibTeX

Reggiani, Claudio; "e, Yann-A; Pozzolo, Andrea Dal; Olsen, Catharina; Bontempi, Gianluca

Minimum Redundancy Maximum Relevance: MapReduce implementation using Apache Hadoop Miscellaneous

2014, (Conference: Benelearn 2014).

Links | BibTeX

"i, Lo

Blind inverse imaging with positivity constraints PhD Thesis

2014, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

2013

Olsen, Catharina

Causal inference and prior integration in bioinformatics using information theory PhD Thesis

2013, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Bontempi, Gianluca; Taieb, Souhaib Ben

Statistical foundations of machine learning Book

Otexts, Online Books, 2013, (Language of publication: fr).

Links | BibTeX

Govorun, Maria

Pension and health insurance, phase-type modeling PhD Thesis

2013, (Funder: Universite Libre de Bruxelles).

Links | BibTeX

Olsen, Catharina; Haibe-Kains, Benjamin; Quackenbush, John; Bontempi, Gianluca

On the Integration of Prior Knowledge in the Inference of Regulatory Networks. Book Chapter

In: World Scientific, 2013, (Language of publication: fr).

Links | BibTeX

Olsen, Catharina

Causal inference and prior integration in bioinformatics using information theory PhD Thesis

2013, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Govorun, Maria

Pension and health insurance, phase-type modeling PhD Thesis

2013, (Funder: Universite Libre de Bruxelles).

Abstract | Links | BibTeX

Cilia, Elisa; Pancsa, Rita; Tompa, Peter; Lenaerts, Tom; Vranken, Wim

From protein sequence to dynamics and disorder with DynaMine. Journal Article

In: Nature communications, 4 , pp. 2741, 2013, (DOI: 10.1038/ncomms3741).

Abstract | Links | BibTeX

Bontempi, Gianluca; Taieb, Souhaib Ben

Statistical foundations of machine learning Book

Otexts, Online Books, 2013, (Language of publication: fr).

Links | BibTeX

Traulsen, Arne; Lenaerts, Tom; Pacheco, Jorge M J M; Dingli, David

On the dynamics of neutral mutations in a mathematical model for a homogeneous stem cell population. Journal Article

In: Journal of the Royal Society, Interface / the Royal Society, 10 (79), pp. 20120810, 2013, (DOI: 10.1098/rsif.2012.0810).

Abstract | Links | BibTeX

Han, The Anh T A H; Pereira, Luís Moniz; Santos, Francisco C; Lenaerts, Tom

Good agreements make good friends. Journal Article

In: Scientific reports, 3 , pp. 2695, 2013, (DOI: 10.1038/srep02695).

Abstract | Links | BibTeX

Haibe-Kains, Benjamin; Desmedt, Christine; Leo, Angelo Di; Azambuja, Evandro; Larsimont, Denis; Selleslags, Jean; Delaloge, Suzette; Duhem, Caroline; Kains, Jean-Pierre; Carly, Birgit; Maerevoet, Marie; Vindevoghel, Anita; Rouas, Ghizlane; cc, Fran; Durbecq, Virginie; Cardoso, Fatima; Salgado, Roberto; Rovere, Rodrigo Kraft; Bontempi, Gianluca; Michiels, Stefan; Buyse, Marc; Nogaret, Jean-Marie; Qi, Yuan; Symmans, William Fraser; Pusztai, Lajos; D'Hondt, Veronique; Piccart-Gebhart, Martine; Sotiriou, Christos

Genome-wide gene expression profiling to predict resistance to anthracyclines in breast cancer patients Journal Article

In: Genomics Data, 1 , pp. 7-10, 2013, (DOI: 10.1016/j.gdata.2013.09.001).

Abstract | Links | BibTeX

Bonnechere, Bruno; Wermenbol, Vanessa; Dan, Bernard; Salvia, Patrick; "e, Yann-A; Bontempi, Gianluca; Vansummeren, Stijn; Sholukha, Victor; Moiseev, Fedor; Jansen, Bart; Rooze, Marcel; Jan, Serge Van Sint

Management and interpretation of medical data related to cerebral pasly: the ICT4 Rehab project Journal Article

In: European journal of paediatric neurology, 17 (1), pp. 32, 2013, (Language of publication: na).

Links | BibTeX

Dedeurwaerder, Sarah; Defrance, Matthieu; Bizet, Martin; Calonne, Emilie; Bontempi, Gianluca; cc, Fran

A comprehensive overview of Infinium Human Methylation450 data processing Journal Article

In: Briefings in bioinformatics, 15 (6), pp. 929-941, 2013, (DOI: 0.1093/bib/bbt054).

Abstract | Links | BibTeX

Papillon-Cavanagh, Simon; Jay, Nicolas De; Hachem, Nehme; Olsen, Catharina; Bontempi, Gianluca; Aerts, Hugo J W L; Quackenbush, John; Haibe-Kains, Benjamin

Comparison and validation of genomic predictors for anticancer drug sensitivity. Journal Article

In: Journal of the American Medical Informatics Association, 20 (4), pp. 597-602, 2013, (DOI: 10.1136/amiajnl-2012-001442).

Abstract | Links | BibTeX

Lerman, Liran; Medeiros, Stéphane Fernandes; Veshchikov, Nikita; Meuter, Cédric; Bontempi, Gianluca; Markowitch, Olivier

Semi-Supervised Template Attack Journal Article

In: Lecture Notes in Computer Science, 7864 , pp. 184-199, 2013, (DOI: 10.1007/978-3-642-40026-1_12).

Abstract | Links | BibTeX

Jay, Nicolas De; Papillon-Cavanagh, Simon; Olsen, Catharina; El-Hachem, N; Bontempi, Gianluca; Haibe-Kains, Benjamin

mRMRe: an R package for parallelized mRMR ensemble feature selection Journal Article

In: Bioinformatics, 2013, (DOI: 10.1093/bioinformatics/btt383).

Abstract | Links | BibTeX

Bontempi, Gianluca; Taieb, Souhaib Ben; "e, Yann-A

Machine learning strategies for time series forecasting Journal Article

In: Lecture Notes in Business Information Processing, 138 LNBIP , pp. 62-77, 2013, (DOI: 10.1007/978-3-642-36318-4_3).

Abstract | Links | BibTeX

Lopes, Miguel; Bontempi, Gianluca

Experimental assessment of static and dynamic algorithms for gene regulation inference from time series expression data Journal Article

In: Frontiers in Genetics, 4 (DEC), 2013, (DOI: 10.3389/fgene.2013.00303).

Abstract | Links | BibTeX

Olsen, Catharina; Haibe-Kains, Benjamin; Quackenbush, John; Bontempi, Gianluca

On the Integration of Prior Knowledge in the Inference of Regulatory Networks. Book Chapter

In: World Scientific, 2013, (Language of publication: fr).

Links | BibTeX

Lerman, Liran; Markowitch, Olivier; Bontempi, Gianluca; Taieb, Souhaib Ben

A time series approach for profiling attack Journal Article

In: Lecture notes in computer science, 8204 , pp. 75-94, 2013, (DOI: 10.1007/978-3-642-41224-0_7).

Abstract | Links | BibTeX

Pozzolo, Andrea Dal; Caelen, Olivier; Waterschoot, Serge; Bontempi, Gianluca

Racing for unbalanced methods selection Journal Article

In: Lecture notes in computer science, 8206 LNCS , pp. 24-31, 2013, (DOI: 10.1007/978-3-642-41278-3_4).

Abstract | Links | BibTeX

Jan, Serge Van Sint; Wermenbol, Vanessa; Bogaert, Patrick Van; Desloovere, Kaat; Degelaen, Marc; Dan, Bernard; Salvia, P; Bonnechere, Bruno; "e, Yann-A; Bontempi, Gianluca; Vansummeren, Stijn; Sholukha, Victor; Moiseev, Fedor; Rooze, Marcel

Recherche intégrée relative `a l’appareil musculosquelettique : application `a la prise en charge clinique de l’infirmité motrice cérébrale (IMC) – le projet ICT4Rehab Journal Article

In: Médecine, 29 (5), pp. 529-536, 2013, (Language of publication: na).

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Olsen, Catharina; Bontempi, Gianluca; Quackenbush, John; Haibe-Kains, Benjamin

Data-driven validation of gene regulatory networks using knock-down data Miscellaneous

2013, (Conference: 8th Benelux Bioinformatics Conference (BBC13)).

Links | BibTeX

898 entries « 2 of 18 »